FAIL Bio-Emboss-5.0.0.1 i686-linux-64int 2.6.17-2-k7

This distribution has been tested as part of the cpan-testers
effort to test as many new uploads to CPAN as possible.  See
http://testers.cpan.org/

Please cc any replies to cpan-testers@perl.org to keep other
test volunteers informed and to prevent any duplicate effort.

--
Dear Peter Ernst,
    
This is a computer-generated test report for Bio-Emboss-5.0.0.1, created
automatically by CPAN::Reporter, version 0.99_03, and sent to the CPAN 
Testers mailing list.  If you have received this email directly, it is 
because the person testing your distribution chose to send a copy to your 
CPAN email address; there may be a delay before the official report is
received and processed by CPAN Testers.

Thank you for uploading your work to CPAN.  However, it appears that
there were some problems testing your distribution.

Sections of this report:

    * Tester comments
    * Prerequisites
    * Environment and other context
    * Test output

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester: 

[none provided]

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

    No requirements found

------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    LANG = C
    PATH = /usr/lib/ccache:/home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
    PERL5LIB = 
    PERL5_CPANPLUS_IS_RUNNING = 9578
    PERL5_CPAN_IS_EXECUTING = /home/sand/.cpan/build/Bio-Emboss-5.0.0.1-xLfQM0/Makefile.PL
    PERL5_CPAN_IS_RUNNING = 9578
    PERL_MM_USE_DEFAULT = 1
    SHELL = /usr/bin/zsh
    TERM = screen

Perl special variables (and OS-specific diagnostics, for MSWin32):

    Perl: $^X = /home/src/perl/repoperls/installed-perls/perl/p0fQi13/perl-5.8.0@28966/bin/perl
    UID:  $<  = 1005
    EUID: $>  = 1005
    GID:  $(  = 1005 1005
    EGID: $)  = 1005 1005

Perl module toolchain versions installed:

    Module              Have   
    ------------------- -------
    CPAN                1.91_53
    Cwd                 3.25   
    ExtUtils::CBuilder  0.19   
    ExtUtils::Command   1.13   
    ExtUtils::Install   1.41   
    ExtUtils::MakeMaker 6.36   
    ExtUtils::Manifest  1.51   
    ExtUtils::ParseXS   2.16_01
    File::Spec          3.25   
    Module::Build       0.2808 
    Module::Signature   0.55   
    Test::Harness       2.64   
    Test::More          0.70   
    YAML                0.62   
    YAML::Syck          0.97   
    version             0.6701 

------------------------------
TEST OUTPUT
------------------------------

Output from '/usr/bin/make':

cp Emboss.pm blib/lib/Bio/Emboss.pm
cp lib/Bio/Emboss/Methods.pm blib/lib/Bio/Emboss/Methods.pm
/home/src/perl/repoperls/installed-perls/perl/p0fQi13/perl-5.8.0@28966/bin/perl /home/src/perl/repoperls/installed-perls/perl/p0fQi13/perl-5.8.0@28966/lib/5.9.4/ExtUtils/xsubpp  -typemap /home/src/perl/repoperls/installed-perls/perl/p0fQi13/perl-5.8.0@28966/lib/5.9.4/ExtUtils/typemap -typemap typemap  Emboss.xs > Emboss.xsc && mv Emboss.xsc Emboss.c
cc -c  -I.  -DDEBUGGING -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g   -DVERSION=\"5.0.0.1\" -DXS_VERSION=\"5.0.0.1\" -fpic "-I/home/src/perl/repoperls/installed-perls/perl/p0fQi13/perl-5.8.0@28966/lib/5.9.4/i686-linux-64int/CORE"   Emboss.c
In file included from /usr/include/ajfeat.h:22,
                 from /usr/include/ajax.h:31,
                 from /usr/include/emboss.h:4,
                 from emboss_perl.h:61,
                 from Emboss.xs:7:
/usr/include/ajreg.h:19:27: error: pcre_internal.h: No such file or directory
In file included from /usr/include/ajfeat.h:22,
                 from /usr/include/ajax.h:31,
                 from /usr/include/emboss.h:4,
                 from emboss_perl.h:61,
                 from Emboss.xs:7:
/usr/include/ajreg.h:40: error: expected specifier-qualifier-list before 'real_pcre'
In file included from /usr/include/emboss.h:5,
                 from emboss_perl.h:61,
                 from Emboss.xs:7:
/usr/include/ajgraph.h:29:20: error: plplot.h: No such file or directory
In file included from /usr/include/emboss.h:5,
                 from emboss_perl.h:61,
                 from Emboss.xs:7:
/usr/include/ajgraph.h:81: error: expected ')' before 'xx0'
/usr/include/ajgraph.h:82: error: expected ')' before 'xx0'
/usr/include/ajgraph.h:84: error: expected ')' before 'xcentre'
/usr/include/ajgraph.h:115: error: expected ')' before 'xx0'
/usr/include/ajgraph.h:116: error: expected ')' before 'xx0'
/usr/include/ajgraph.h:117: error: expected ')' before '*' token
/usr/include/ajgraph.h:135: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:136: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:136: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:146: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:147: error: expected ')' before '*' token
/usr/include/ajgraph.h:162: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:162: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:163: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:163: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:169: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:169: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:170: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:170: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:172: error: expected ')' before 'xx0'
/usr/include/ajgraph.h:173: error: expected ')' before 'xx0'
/usr/include/ajgraph.h:189: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:189: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:191: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:192: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:193: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:194: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:196: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:198: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:200: error: expected ')' before 'xx1'
/usr/include/ajgraph.h:203: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:204: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:204: error: expected declaration specifiers or '...' before 'PLFLT'
/usr/include/ajgraph.h:283: error: expected ')' before 'xcentre'
/usr/include/ajgraph.h:285: error: expected '=', ',', ';', 'asm' or '__attribute__' before '*' token
/usr/include/ajgraph.h:287: error: expected ')' before 'xcentre'
/usr/include/ajgraph.h:291: error: expected ')' before 'xcentre'
/usr/include/ajgraph.h:294: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'ajGraphTextLength'
/usr/include/ajgraph.h:296: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'ajGraphTextHeight'
/usr/include/ajgraph.h:297: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'ajGraphDistPts'
/usr/include/ajgraph.h:298: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'ajGraphFitTextOnLine'
/usr/include/ajgraph.h:302: error: expected ')' before 'xcentre'
make: *** [Emboss.o] Error 1


--

Summary of my perl5 (revision 5 version 9 subversion 4) configuration:
  Platform:
    osname=linux, osvers=2.6.17-2-k7, archname=i686-linux-64int
    uname='linux k75 2.6.17-2-k7 #1 smp thu aug 31 13:27:53 utc 2006 i686 gnulinux '
    config_args='-Dprefix=/home/src/perl/repoperls/installed-perls/perl/p0fQi13/perl-5.8.0@28966 -Dinstallusrbinperl=n -Uversiononly -Doptimize=-g -des -Duse64bitint -Dusedevel'
    hint=recommended, useposix=true, d_sigaction=define
    useithreads=undef, usemultiplicity=undef
    useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
    use64bitint=define, use64bitall=undef, uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-DDEBUGGING -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
    optimize='-g',
    cppflags='-DDEBUGGING -fno-strict-aliasing -pipe -I/usr/local/include'
    ccversion='', gccversion='4.0.4 20060507 (prerelease) (Debian 4.0.3-3)', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
    ivtype='long long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=4, prototype=define
  Linker and Libraries:
    ld='cc', ldflags =' -L/usr/local/lib'
    libpth=/usr/local/lib /lib /usr/lib
    libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc
    perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
    libc=/lib/libc-2.3.6.so, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version='2.3.6'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
    cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'

• FAIL Bio-Emboss-5.0.0.1 i686-linux-64int 2.6.17-2-k7 by andreas.koenig.gmwojprw