PASS Bio-Grep-0.10.5 i686-linux-thread-multi 2.6.28-11-generic

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project, supporting the Perl programming language.  See
http://wiki.cpantesters.org/ for more information or email
questions to cpan-testers-discuss@perl.org


--
Dear Markus Riester,
    
This is a computer-generated report for Bio-Grep-0.10.5
on perl 5.8.9, created by CPAN-Reporter-1.1705. 

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester: 

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from './Build test':

# 
# *****************************************************************************
# * Bioperl    : NOT FOUND                                                    *
# * Bioperl-run: NOT FOUND                                                    *
# * Backend    : No backend found in path. You should install the back-ends   *
# *              before running these tests. This way you make sure that the  *
# *              parsers work with your installed version of the back-end.    *
# * EMBOSS     : NOT FOUND                                                    *
# *****************************************************************************
t/00.checkprereq.t ............ ok
t/00.load.t ................... skipped: Bioperl not found
t/10.backends.all.t ........... skipped: Bioperl not found
t/11.backends.guugle.t ........ skipped: guugle not in path
t/11.backends.re.t ............ skipped: Bioperl not found
t/20.filter.t ................. skipped: Bioperl not found
t/30.features.alignments.t .... skipped: Bioperl not found
t/30.features.updownstream.t .. skipped: Bioperl not found
t/40.utils.t .................. skipped: Bioperl not found
t/50.synopsis.t ............... skipped: Bioperl not found
t/perlcritic.t ................ skipped: Author test.  Set $ENV{TEST_AUTHOR} to a true value to run.
t/pod-coverage.t .............. ok
t/pod.t ....................... ok
All tests successful.
Files=13, Tests=26,  3 wallclock secs ( 0.06 usr  0.03 sys +  0.92 cusr  0.10 csys =  1.11 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module               Need  Have    
    -------------------- ----- --------
  ! Bio::AlignIO         0     n/a     
  ! Bio::Factory::EMBOSS 0     n/a     
  ! Bio::Index::Fasta    0     n/a     
  ! Bio::Root::Root      0     n/a     
  ! Bio::Root::Version   0     n/a     
  ! Bio::Seq             0     n/a     
  ! Bio::SeqIO           0     n/a     
    Carp::Assert         0     0.20    
    Class::MethodMaker   2.02  2.15    
    Getopt::Long         2.32  2.37    
    IO::String           1     1.08    
    IPC::Open3           0     1.03    
    perl                 5.8.1 5.008009
    Pod::Usage           0     1.35    
    Readonly             0     1.03    
    ToolSet              0.13  1.00    
    UNIVERSAL::require   0.11  0.13    
    version              0     0.76    

build_requires:

    Module               Need  Have    
    -------------------- ----- --------
    Test::More           0     0.86    


------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    LANG = en_US.UTF-8
    PATH = /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
    PERL5LIB = /home/perl589/perl/cpan/build/ToolSet-1.00-3jzO3q/blib/arch:/home/perl589/perl/cpan/build/ToolSet-1.00-3jzO3q/blib/lib:/home/perl589/perl/cpan/build/Readonly-1.03-ZL92Zg/blib/arch:/home/perl589/perl/cpan/build/Readonly-1.03-ZL92Zg/blib/lib:/home/perl589/perl/cpan/build/Class-MethodMaker-2.15-RIowNE/blib/arch:/home/perl589/perl/cpan/build/Class-MethodMaker-2.15-RIowNE/blib/lib:/home/perl589/perl/cpan/build/Carp-Assert-0.20-763ztd/blib/arch:/home/perl589/perl/cpan/build/Carp-Assert-0.20-763ztd/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 27864
    PERL5_CPAN_IS_RUNNING = 27864
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 14473,27864
    PERL_CR_SMOKER_CURRENT = Bio-Grep-0.10.5
    PERL_EXTUTILS_AUTOINSTALL = --defaultdeps
    PERL_MM_USE_DEFAULT = 1
    SHELL = /bin/bash
    TERM = xterm

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /home/perl589/perl/bin/perl
    $UID/$EUID = 1006 / 1006
    $GID = 1006 1006
    $EGID = 1006 1006

Perl module toolchain versions installed:

    Module              Have  
    ------------------- ------
    CPAN                1.9304
    Cwd                 3.29  
    ExtUtils::CBuilder  0.24  
    ExtUtils::Command   1.16  
    ExtUtils::Install   1.52  
    ExtUtils::MakeMaker 6.50  
    ExtUtils::Manifest  1.56  
    ExtUtils::ParseXS   2.19  
    File::Spec          3.29  
    Module::Build       0.33  
    Module::Signature   n/a   
    Test::Harness       3.17  
    Test::More          0.86  
    YAML                0.68  
    YAML::Syck          1.07  
    version             0.76  


--

Summary of my perl5 (revision 5 version 8 subversion 9) configuration:
  Platform:
    osname=linux, osvers=2.6.28-11-generic, archname=i686-linux-thread-multi
    uname='linux nightshade 2.6.28-11-generic #42-ubuntu smp fri apr 17 01:57:59 utc 2009 i686 gnulinux '
    config_args=''
    hint=recommended, useposix=true, d_sigaction=define
    usethreads=define use5005threads=undef useithreads=define usemultiplicity=define
    useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
    use64bitint=undef use64bitall=undef uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
    optimize='-O2',
    cppflags='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -I/usr/local/include'
    ccversion='', gccversion='4.3.3', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=1234
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
    ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=4, prototype=define
  Linker and Libraries:
    ld='cc', ldflags =' -L/usr/local/lib'
    libpth=/usr/local/lib /lib /usr/lib /usr/lib64
    libs=-lnsl -lgdbm -ldl -lm -lcrypt -lutil -lpthread -lc
    perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
    libc=/lib/libc-2.9.so, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version='2.9'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
    cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib'

• PASS Bio-Grep-0.10.5 i686-linux-thread-multi 2.6.28-11-generic by cpan.dcollins.smoker6
• PASS Bio-Grep-0.10.5 i686-linux-thread-multi 2.6.28-11-generic by cpan.dcollins.smoker8