PASS Bio-Grep-0.10.3 i686-linux-thread-multi-64int-ld 2.6.24-16-generic

This distribution has been tested as part of the cpan-testers
effort to test as many new uploads to CPAN as possible.  See
http://testers.cpan.org/


--
Dear Markus Riester,
    
This is a computer-generated report for Bio-Grep-0.10.3
on perl 5.8.8, created by CPAN-Reporter-1.15. 

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester: 

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from './Build test':

t/00.checkprereq................# 
# *****************************************************************************
# * Bioperl    : NOT FOUND                                                    *
# * Bioperl-run: NOT FOUND                                                    *
# * Backend    : No backend found in path. You should install the back-ends   *
# *              before running these tests. This way you make sure that the  *
# *              parsers work with your installed version of the back-end.    *
# * EMBOSS     : NOT FOUND                                                    *
# *****************************************************************************
ok
t/00.load.......................skipped: Bioperl not found
t/10.backends.all...............skipped: Bioperl not found
t/11.backends.guugle............skipped: guugle not in path
t/11.backends.re................skipped: Bioperl not found
t/20.filter.....................skipped: Bioperl not found
t/30.features.alignments........skipped: Bioperl not found
t/30.features.updownstream......skipped: Bioperl not found
t/40.utils......................skipped: Bioperl not found
t/50.synopsis...................skipped: Bioperl not found
t/perlcritic....................skipped: Author test.  Set $ENV{TEST_AUTHOR} to a true value to run.
t/pod-coverage..................skipped: Test::Pod::Coverage 1.04 required for testing POD coverage
t/pod...........................skipped: Test::Pod 1.14 required for testing POD
All tests successful.
Files=13, Tests=1,  1 wallclock secs ( 0.02 usr  0.06 sys +  0.23 cusr  0.30 csys =  0.61 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module               Need  Have    
    -------------------- ----- --------
  ! Bio::AlignIO         0     n/a     
  ! Bio::Factory::EMBOSS 0     n/a     
  ! Bio::Index::Fasta    0     n/a     
  ! Bio::Root::Root      0     n/a     
  ! Bio::Root::Version   0     n/a     
  ! Bio::Seq             0     n/a     
  ! Bio::SeqIO           0     n/a     
    Carp::Assert         0     0.20    
    Class::MethodMaker   2.02  2.11    
    Getopt::Long         2.32  2.35    
    IO::String           1     1.08    
    IPC::Open3           0     1.02    
    perl                 5.8.1 5.008008
    Pod::Usage           0     1.33    
    ToolSet              0.13  0.13    
    UNIVERSAL::require   0.11  0.11    
    version              0     0.75    

------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    LANG = en_US.UTF-8
    LD_LIBRARY_PATH = /home/david/opt/subversion/lib
    PATH = .:/home/david/bin:/home/david/git/utility-scripts:/home/david/perl/current/bin:.:/home/david/bin:/home/david/git/utility-scripts:/home/david/perl/current/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
    PERL5LIB = /home/david/.cpan/build/ToolSet-0.13-1qGM6T/blib/arch:/home/david/.cpan/build/ToolSet-0.13-1qGM6T/blib/lib:/home/david/.cpan/build/UNIVERSAL-require-0.11-cIFeC0/blib/arch:/home/david/.cpan/build/UNIVERSAL-require-0.11-cIFeC0/blib/lib:/home/david/.cpan/build/Carp-Assert-0.20-ln8B_n/blib/arch:/home/david/.cpan/build/Carp-Assert-0.20-ln8B_n/blib/lib:/home/david/.cpan/build/version-0.75-T7dD_w/blib/arch:/home/david/.cpan/build/version-0.75-T7dD_w/blib/lib:/home/david/.cpan/build/Class-MethodMaker-2.11-8ZPego/blib/arch:/home/david/.cpan/build/Class-MethodMaker-2.11-8ZPego/blib/lib:/home/david/.cpan/build/IO-String-1.08-tyGALd/blib/arch:/home/david/.cpan/build/IO-String-1.08-tyGALd/blib/lib
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 3389
    PERL5_CPAN_IS_RUNNING = 3389
    PERL5_CPAN_IS_RUNNING_IN_RECURSION = 4333,3389
    PERL_CR_SMOKER_CURRENT = Bio-Grep-0.10.3
    PERL_MM_USE_DEFAULT = 1
    SHELL = /bin/bash
    TERM = screen

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /home/david/perl/5.8.8-threads/bin/perl
    $UID/$EUID = 1000 / 1000
    $GID = 1000 1000 116 115 107 46 44 30 29 25 24 20 4
    $EGID = 1000 1000 116 115 107 46 44 30 29 25 24 20 4

Perl module toolchain versions installed:

    Module              Have   
    ------------------- -------
    CPAN                1.92_62
    Cwd                 3.2701 
    ExtUtils::CBuilder  0.23   
    ExtUtils::Command   1.13   
    ExtUtils::Install   1.45   
    ExtUtils::MakeMaker 6.44   
    ExtUtils::Manifest  1.51   
    ExtUtils::ParseXS   n/a    
    File::Spec          3.2701 
    Module::Build       0.2808 
    Module::Signature   n/a    
    Test::Harness       3.10   
    Test::More          0.80   
    YAML                0.66   
    YAML::Syck          1.05   
    version             0.75   


--

Summary of my perl5 (revision 5 version 8 subversion 8) configuration:
  Platform:
    osname=linux, osvers=2.6.24-16-generic, archname=i686-linux-thread-multi-64int-ld
    uname='linux griffon 2.6.24-16-generic #1 smp thu apr 10 13:23:42 utc 2008 i686 gnulinux '
    config_args='-de -Uversiononly -Dusedevel -Dusemorebits -Dprefix=/home/david/perl/5.8.8-threads -Dmydomain=.hyperbolic.net -Dcf_email=dagolden@cpan.org -Dperladmin=dagolden@cpan.org -Dcc=gcc -Dusethreads'
    hint=recommended, useposix=true, d_sigaction=define
    usethreads=define use5005threads=undef useithreads=define usemultiplicity=define
    useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
    use64bitint=define use64bitall=undef uselongdouble=define
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='gcc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
    optimize='-O2',
    cppflags='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include'
    ccversion='', gccversion='4.2.3 (Ubuntu 4.2.3-2ubuntu7)', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
    ivtype='long long', ivsize=8, nvtype='long double', nvsize=12, Off_t='off_t', lseeksize=8
    alignbytes=4, prototype=define
  Linker and Libraries:
    ld='gcc', ldflags =' -L/usr/local/lib'
    libpth=/usr/local/lib /lib /usr/lib
    libs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
    perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
    libc=/lib/libc-2.7.so, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version='2.7'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
    cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'

• PASS Bio-Grep-0.10.3 i686-linux-thread-multi-64int-ld 2.6.24-16-generic by DAGOLDEN