FAIL Bio-NEXUS-0.69b i686-linux-64int 2.6.14

This distribution has been tested as part of the cpan-testers
effort to test as many new uploads to CPAN as possible.  See
http://testers.cpan.org/


--
Dear Thomas Hladish,
    
This is a computer-generated report for Bio-NEXUS-0.69b
on perl 5.8.8, created by CPAN-Reporter-1.1404. 

Thank you for uploading your work to CPAN.  However, there was a problem
testing your distribution.

If you think this report is invalid, please consult the CPAN Testers Wiki
for suggestions on how to avoid getting FAIL reports for missing library
or binary dependencies, unsupported operating systems, and so on:

http://cpantest.grango.org/wiki/CPANAuthorNotes

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester: 

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 /home/src/perl/repoperls/installed-perls/maint-5.8/pIS17Oa/perl-5.8.0@27512/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/_perl_module-loading....................ok
t/_perl_perlpod...........................ok
t/_perl_podcoverage.......................ok
t/assumptionsblock_options................ok
t/assumptionsblock_wtset-scores...........ok
t/block_link-and-title....................ok
t/charactersblock_methods-01..............ok
t/charactersblock_methods-02..............ok
t/matrix_character-state-frequency........ok
t/matrix_charactersblock-interleave.......ok
t/matrix_historyblock-probab-distrib......ok
t/matrix_polymorphic-and-uncertain........ok
t/nexus_add-otu-clone.....................WARN Bio::NEXUS::add_otu_clone [$PREFIX/Bio/NEXUS.pm, 797] - not fully implemented!
WARN Bio::NEXUS::add_otu_clone [$PREFIX/Bio/NEXUS.pm, 797] - not fully implemented!
WARN Bio::NEXUS::add_otu_clone [$PREFIX/Bio/NEXUS.pm, 797] - not fully implemented!
Undefined subroutine &main::set called at t/nexus_add-otu-clone.t line 59.
# Looks like your test died just after 4.
 Dubious, test returned 255 (wstat 65280, 0xff00)
 All 4 subtests passed 
t/nexus_block-level-commands..............ok
t/nexus_taxa-labels-quoted................ok
t/nexus_taxa-labels-squarebrackets........ok
t/nexus_taxa-labels.......................ok
t/nexus_wrong_format......................ok
t/nhxcmd_parsing..........................ok
t/notesblock_methods......................skipped: The notes block implementation is not complete
t/tree_equals.............................ok
t/tree_methods-01.........................ok
t/tree_methods-02.........................ok
t/tree_parsing............................ok
t/tree_support-values.....................ok
t/treesblock_methods......................ok
t/uncat_clone_methods.....................ok
t/uncat_datablock_clustalw................ok
t/uncat_equals_methods....................ok
t/uncat_excessive_whitespace..............ok
t/uncat_ntax-nchar-dimensions.............ok
t/uncat_object-file-equality..............ok
t/uncat_shared-commands...................ok
t/uncat_todo..............................ok
t/uncat_write.............................ok

Test Summary Report
-------------------
t/nexus_add-otu-clone.t               (Wstat: 65280 Tests: 4 Failed: 0)
  Non-zero exit status: 255
t/nexus_wrong_format.t                (Wstat: 0 Tests: 1 Failed: 0)
  TODO passed:   1
t/uncat_ntax-nchar-dimensions.t       (Wstat: 0 Tests: 4 Failed: 0)
  TODO passed:   3
Files=35, Tests=492, 14 wallclock secs ( 0.51 usr  0.08 sys + 11.71 cusr  0.69 csys = 12.99 CPU)
Result: FAIL
Failed 1/35 test programs. 0/492 subtests failed.
make: *** [test_dynamic] Fehler 255

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module     Need Have
    ---------- ---- ----
    Test::More 0    0.80

------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    LANG = de_DE.UTF-8
    PATH = /usr/lib/ccache:/home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
    PERL5LIB = 
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 25531
    PERL5_CPAN_IS_RUNNING = 25531
    PERL_MM_USE_DEFAULT = 1
    SHELL = /usr/bin/zsh
    TERM = screen

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /home/src/perl/repoperls/installed-perls/maint-5.8/pIS17Oa/perl-5.8.0@27512/bin/perl
    $UID/$EUID = 1005 / 1005
    $GID = 1005 1005
    $EGID = 1005 1005

Perl module toolchain versions installed:

    Module              Have   
    ------------------- -------
    CPAN                1.92_60
    Cwd                 3.2701 
    ExtUtils::CBuilder  0.23   
    ExtUtils::Command   1.14   
    ExtUtils::Install   1.50   
    ExtUtils::MakeMaker 6.44   
    ExtUtils::Manifest  1.51   
    ExtUtils::ParseXS   2.19   
    File::Spec          3.2701 
    Module::Build       0.2808 
    Module::Signature   0.55   
    Test::Harness       3.10   
    Test::More          0.80   
    YAML                0.66   
    YAML::Syck          1.04   
    version             0.74   


--

Summary of my perl5 (revision 5 version 8 subversion 8) configuration:
  Platform:
    osname=linux, osvers=2.6.14, archname=i686-linux-64int
    uname='linux k75 2.6.14 #1 fri jan 27 16:22:47 cet 2006 i686 gnulinux '
    config_args='-Dprefix=/home/src/perl/repoperls/installed-perls/maint-5.8/pIS17Oa/perl-5.8.0@27512 -Dinstallusrbinperl=n -Uversiononly -Doptimize=-g -des -Duse64bitint -Dusedevel'
    hint=recommended, useposix=true, d_sigaction=define
    usethreads=undef use5005threads=undef useithreads=undef usemultiplicity=undef
    useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
    use64bitint=define use64bitall=undef uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-DDEBUGGING -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
    optimize='-g',
    cppflags='-DDEBUGGING -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include'
    ccversion='', gccversion='4.0.3 20060304 (prerelease) (Debian 4.0.2-10)', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
    ivtype='long long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=4, prototype=define
  Linker and Libraries:
    ld='cc', ldflags =' -L/usr/local/lib'
    libpth=/usr/local/lib /lib /usr/lib
    libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lc
    perllibs=-lnsl -ldl -lm -lcrypt -lutil -lc
    libc=/lib/libc-2.3.6.so, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version='2.3.6'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
    cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'

• FAIL Bio-NEXUS-0.69b i686-linux-64int 2.6.14 by andreas.koenig.gmwojprw