PASS Bio-Grep-0.10.3 i386-freebsd-thread-multi 6.2-release

This distribution has been tested as part of the cpan-testers
effort to test as many new uploads to CPAN as possible.  See
http://testers.cpan.org/


--
Dear Markus Riester,
    
This is a computer-generated report for Bio-Grep-0.10.3
on perl 5.10.0, created by CPAN-Reporter-1.1404. 

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester: 

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 /home/david/cpantesting/perl-5.10.0/bin/perl5.10.0 "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00.checkprereq..............# 
# *****************************************************************************
# * Bioperl    : NOT FOUND                                                    *
# * Bioperl-run: NOT FOUND                                                    *
# * Backend    : No backend found in path. You should install the back-ends   *
# *              before running these tests. This way you make sure that the  *
# *              parsers work with your installed version of the back-end.    *
# * EMBOSS     : NOT FOUND                                                    *
# *****************************************************************************
ok
t/00.load.....................skipped
        all skipped: Bioperl not found
t/10.backends.all.............skipped
        all skipped: Bioperl not found
t/11.backends.guugle..........skipped
        all skipped: guugle not in path
t/11.backends.re..............skipped
        all skipped: Bioperl not found
t/20.filter...................skipped
        all skipped: Bioperl not found
t/30.features.alignments......skipped
        all skipped: Bioperl not found
t/30.features.updownstream....skipped
        all skipped: Bioperl not found
t/40.utils....................skipped
        all skipped: Bioperl not found
t/50.synopsis.................skipped
        all skipped: Bioperl not found
t/perlcritic..................skipped
        all skipped: Author test.  Set $ENV{TEST_AUTHOR} to a true value to run.
t/pod-coverage................skipped
        all skipped: Test::Pod::Coverage 1.04 required for testing POD coverage
t/pod.........................skipped
        all skipped: Test::Pod 1.14 required for testing POD
All tests successful, 12 tests skipped.
Files=13, Tests=1,  2 wallclock secs ( 0.17 cusr +  0.72 csys =  0.89 CPU)

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module               Need Have
    -------------------- ---- ----
  ! Bio::AlignIO         0    n/a 
  ! Bio::Factory::EMBOSS 0    n/a 
  ! Bio::Index::Fasta    0    n/a 
  ! Bio::Root::Root      0    n/a 
  ! Bio::Root::Version   0    n/a 
  ! Bio::Seq             0    n/a 
  ! Bio::SeqIO           0    n/a 
    Carp::Assert         0    0.20
    Class::MethodMaker   2.02 2.11
    Getopt::Long         2.32 2.37
    IO::String           1    1.08
    IPC::Open3           0    1.02
    Pod::Usage           0    1.35
    ToolSet              0.13 0.13
    UNIVERSAL::require   0.11 0.11
    version              0    0.74

------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    PATH = /sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/usr/X11R6/bin:/home/david/bin
    PERL5LIB = 
    PERL5_CPANPLUS_IS_RUNNING = 35940
    PERL5_CPAN_IS_RUNNING = 35940
    SHELL = /usr/local/bin/bash
    TERM = screen

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /home/david/cpantesting/perl-5.10.0/bin/perl5.10.0
    $UID/$EUID = 1001 / 1001
    $GID = 1001 1001 1001 0
    $EGID = 1001 1001 1001 0

Perl module toolchain versions installed:

    Module              Have     
    ------------------- ---------
    CPAN                1.9205   
    Cwd                 3.2501   
    ExtUtils::CBuilder  0.21     
    ExtUtils::Command   1.13     
    ExtUtils::Install   1.44     
    ExtUtils::MakeMaker 6.42     
    ExtUtils::Manifest  1.51_01  
    ExtUtils::ParseXS   2.18_02  
    File::Spec          3.2501   
    Module::Build       0.2808_01
    Module::Signature   n/a      
    Test::Harness       2.64     
    Test::More          0.80     
    YAML                0.66     
    YAML::Syck          n/a      
    version             0.74     


--

Summary of my perl5 (revision 5 version 10 subversion 0) configuration:
  Platform:
    osname=freebsd, osvers=6.2-release, archname=i386-freebsd-thread-multi
    uname='freebsd poacher.barnyard.co.uk 6.2-release freebsd 6.2-release #0: fri jan 12 10:40:27 utc 2007 root@dessler.cse.buffalo.edu:usrobjusrsrcsysgeneric i386 '
    config_args='-de -Dprefix=/home/david/cpantesting/perl-5.10.0 -Dusethreads'
    hint=recommended, useposix=true, d_sigaction=define
    useithreads=define, usemultiplicity=define
    useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
    use64bitint=undef, use64bitall=undef, uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -I/usr/local/include',
    optimize='-O',
    cppflags='-DHAS_FPSETMASK -DHAS_FLOATINGPOINT_H -fno-strict-aliasing -pipe -I/usr/local/include'
    ccversion='', gccversion='3.4.6 [FreeBSD] 20060305', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=1234
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
    ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=4, prototype=define
  Linker and Libraries:
    ld='cc', ldflags ='-pthread -Wl,-E  -L/usr/local/lib'
    libpth=/usr/lib /usr/local/lib
    libs=-lgdbm -lm -lcrypt
    perllibs=-lm -lcrypt
    libc=, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' '
    cccdlflags='-DPIC -fPIC', lddlflags='-shared  -L/usr/local/lib'

• PASS Bio-Grep-0.10.3 i386-freebsd-thread-multi 6.2-release by david