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PASS Bio-Grep-0.10.3 i686-linux-thread-multi-64int 2.6.14

From:
andreas.koenig.gmwojprw
Date:
April 17, 2008 13:31
Subject:
PASS Bio-Grep-0.10.3 i686-linux-thread-multi-64int 2.6.14
This distribution has been tested as part of the cpan-testers
effort to test as many new uploads to CPAN as possible.  See
http://testers.cpan.org/


--
Dear Markus Riester,
    
This is a computer-generated report for Bio-Grep-0.10.3
on perl 5.8.7, created by CPAN-Reporter-1.1402. 

Thank you for uploading your work to CPAN.  Congratulations!
All tests were successful.

Sections of this report:

    * Tester comments
    * Program output
    * Prerequisites
    * Environment and other context

------------------------------
TESTER COMMENTS
------------------------------

Additional comments from tester: 

this report is from an automated smoke testing program
and was not reviewed by a human for accuracy

------------------------------
PROGRAM OUTPUT
------------------------------

Output from '/usr/bin/make test':

PERL_DL_NONLAZY=1 /home/src/perl/repoperls/installed-perls/maint-5.8/pbyWflA/perl-5.8.0@26727/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00.checkprereq................# 
# *****************************************************************************
# * Bioperl    : NOT FOUND                                                    *
# * Bioperl-run: NOT FOUND                                                    *
# * Backend    : No backend found in path. You should install the back-ends   *
# *              before running these tests. This way you make sure that the  *
# *              parsers work with your installed version of the back-end.    *
# * EMBOSS     : NOT FOUND                                                    *
# *****************************************************************************
ok
t/00.load.......................skipped: Bioperl not found
t/10.backends.all...............skipped: Bioperl not found
t/11.backends.guugle............skipped: guugle not in path
t/11.backends.re................skipped: Bioperl not found
t/20.filter.....................skipped: Bioperl not found
t/30.features.alignments........skipped: Bioperl not found
t/30.features.updownstream......skipped: Bioperl not found
t/40.utils......................skipped: Bioperl not found
t/50.synopsis...................skipped: Bioperl not found
t/perlcritic....................skipped: Author test.  Set $ENV{TEST_AUTHOR} to a true value to run.
t/pod-coverage..................ok
t/pod...........................ok
All tests successful.
Files=13, Tests=26,  2 wallclock secs ( 0.07 usr  0.01 sys +  1.58 cusr  0.18 csys =  1.84 CPU)
Result: PASS

------------------------------
PREREQUISITES
------------------------------

Prerequisite modules loaded:

requires:

    Module               Need Have
    -------------------- ---- ----
  ! Bio::AlignIO         0    n/a 
  ! Bio::Factory::EMBOSS 0    n/a 
  ! Bio::Index::Fasta    0    n/a 
  ! Bio::Root::Root      0    n/a 
  ! Bio::Root::Version   0    n/a 
  ! Bio::Seq             0    n/a 
  ! Bio::SeqIO           0    n/a 
    Carp::Assert         0    0.20
    Class::MethodMaker   2.02 2.11
    Getopt::Long         2.32 2.37
    IO::String           1    1.08
    IPC::Open3           0    1.02
    Pod::Usage           0    1.33
    ToolSet              0.13 0.13
    UNIVERSAL::require   0.11 0.11
    version              0    0.74

------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------

Environment variables:

    AUTOMATED_TESTING = 1
    LANG = de_DE.UTF-8
    PATH = /usr/lib/ccache:/home/sand/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games:/usr/local/perl/bin:/usr/X11/bin:/sbin:/usr/sbin
    PERL5LIB = 
    PERL5OPT = 
    PERL5_CPANPLUS_IS_RUNNING = 18949
    PERL5_CPAN_IS_RUNNING = 18949
    PERL_MM_USE_DEFAULT = 1
    SHELL = /usr/bin/zsh
    TERM = screen

Perl special variables (and OS-specific diagnostics, for MSWin32):

    $^X = /home/src/perl/repoperls/installed-perls/maint-5.8/pbyWflA/perl-5.8.0@26727/bin/perl
    $UID/$EUID = 1005 / 1005
    $GID = 1005 1005
    $EGID = 1005 1005

Perl module toolchain versions installed:

    Module              Have   
    ------------------- -------
    CPAN                1.92_60
    Cwd                 3.2701 
    ExtUtils::CBuilder  0.22   
    ExtUtils::Command   1.14   
    ExtUtils::Install   1.50   
    ExtUtils::MakeMaker 6.44   
    ExtUtils::Manifest  1.51   
    ExtUtils::ParseXS   2.19   
    File::Spec          3.2701 
    Module::Build       0.2808 
    Module::Signature   0.55   
    Test::Harness       3.10   
    Test::More          0.80   
    YAML                0.66   
    YAML::Syck          1.04   
    version             0.74   


--

Summary of my perl5 (revision 5 version 8 subversion 7) configuration:
  Platform:
    osname=linux, osvers=2.6.14, archname=i686-linux-thread-multi-64int
    uname='linux k75 2.6.14 #1 fri jan 27 16:22:47 cet 2006 i686 gnulinux '
    config_args='-Dprefix=/home/src/perl/repoperls/installed-perls/maint-5.8/pbyWflA/perl-5.8.0@26727 -Dinstallusrbinperl=n -Uversiononly -des -Duse64bitint -Dusedevel -Dusethreads'
    hint=recommended, useposix=true, d_sigaction=define
    usethreads=define use5005threads=undef useithreads=define usemultiplicity=define
    useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
    use64bitint=define use64bitall=undef uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
    optimize='-O2',
    cppflags='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/include'
    ccversion='', gccversion='4.0.3 20060115 (prerelease) (Debian 4.0.2-7)', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
    ivtype='long long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
    alignbytes=4, prototype=define
  Linker and Libraries:
    ld='cc', ldflags =' -L/usr/local/lib'
    libpth=/usr/local/lib /lib /usr/lib
    libs=-lnsl -lgdbm -ldb -ldl -lm -lcrypt -lutil -lpthread -lc
    perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
    libc=/lib/libc-2.3.5.so, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version='2.3.5'
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
    cccdlflags='-fpic', lddlflags='-shared -L/usr/local/lib'



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