Front page | perl.cpan.testers |
Postings from April 2008
FAIL Wurst-0.51b darwin-thread-multi-64int-2level 8.10.0
Thread Next
From:
chris
Date:
April 13, 2008 07:18
Subject:
FAIL Wurst-0.51b darwin-thread-multi-64int-2level 8.10.0
This distribution has been tested as part of the cpan-testers
effort to test as many new uploads to CPAN as possible. See
http://testers.cpan.org/
Please cc any replies to cpan-testers@perl.org to keep other
test volunteers informed and to prevent any duplicate effort.
--
Dear WURST,
This is a computer-generated error report created automatically by
CPANPLUS, version 0.84. Testers personal comments may appear
at the end of this report.
Thank you for uploading your work to CPAN. However, it appears that
there were some problems testing your distribution.
TEST RESULTS:
Below is the error stack from stage 'make test':
[MSG] [Sun Apr 13 15:15:35 2008] Trying to get 'http://www.cpan.org/authors/id/W/WU/WURST/CHECKSUMS'
[MSG] [Sun Apr 13 15:15:36 2008] Checksum matches for 'Wurst-0.51b.tar.gz'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/MANIFEST'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/Makefile.PL'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/extras/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/extras/testfiles/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/extras/testfiles/1JB0.pdb'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/extras/testfiles/1jb0A.bin'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/extras/testfiles/1jb0A.vec'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/lib/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/lib/Wurst.pm'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/lib/Wurst/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/README'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/Changes'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/pod/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/pod/coding.pod'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/pod/server_notes'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/pod/wurst.pod'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/Makefile.PL'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/Wurst.xs'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/typemap'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/CODE_RULES'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/Makefile.PL'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/TODO'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/align.c'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/align_i.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/altscores.c'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/altscores.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/amino_a.c'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/amino_a.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/bad_angle.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/binver.c'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/binver.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/class_model.c'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/class_model.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/classifyStructure.c'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/classifyStructure.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/cmp_dmat.c'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/cmp_dmat_i.h'
[MSG] [Sun Apr 13 15:15:42 2008] Extracted 'Wurst/src/wurstsrc/common.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/compound.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/compound.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/coord.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/coord.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/coord_i.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/coordinfo.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/coordinfo_i.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/cp_cc_allat+0.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/dbg.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/dbg.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/depend'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/dihedral.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/dihedral.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/e_malloc.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/e_malloc.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/fio.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/fio.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/fx.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/geo_gap.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/geo_gap.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/lsqf.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/lsqf.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/matrix.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/matrix.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/mgc_num.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/mgc_num.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/misc.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/misc.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/model.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/model.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/mprintf.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/mprintf.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/multialign.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/multialign.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/pair_set.c'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/pair_set.h'
[MSG] [Sun Apr 13 15:15:43 2008] Extracted 'Wurst/src/wurstsrc/pair_set_chim.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pair_set_chim.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pair_set_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pair_set_p.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pair_set_p_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/param_fx.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/param_fx_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pdbin.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pdbin_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pdbout.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/pdbout_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/prob_vec.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/prob_vec.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/prob_vec_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/rand.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/rand.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_ac.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_ac.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_ac_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_ac_strct.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_ac_strct.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_ac_strct_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_blst.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_blst.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_mat.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_mat.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_sec.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_sec_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_seq.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/read_seq_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/rescore.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/rescore.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/rmacros.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/scor_set.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/scor_set.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/scor_set_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/score_fx.c'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/score_fx_i.h'
[MSG] [Sun Apr 13 15:15:44 2008] Extracted 'Wurst/src/wurstsrc/score_mat.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_mat.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_mat_i.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_probvec.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_probvec.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_rand.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_rand.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_sec.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_sec_i.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_smat.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/score_smat.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/scratch.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/scratch.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/sec_s.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/sec_s.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/sec_s_i.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/seq.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/seq_i.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/seqprof.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/silly.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/silly.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/solv_data.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/solv_data.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/str.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/str.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/sub_mat.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/vec.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/vec_i.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/yesno.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/COPYING'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/Makefile.PL'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/README'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/blas.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/block_init.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/block_init_source.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/cblas.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/cheb_eval.c'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/chebyshev.h'
[MSG] [Sun Apr 13 15:15:45 2008] Extracted 'Wurst/src/wurstsrc/gsldir/copy.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/copy_source.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/ddot.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/dgemm.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/dgemv.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/dtrmv.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/dtrsv.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/erfc.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/error.c'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/error.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/eval.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_blas.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_blas_types.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_block.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_block_double.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_cblas.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_check_range.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_complex.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_complex_math.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_errno.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_linalg.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_machine.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_math.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_matrix_double.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_message.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_mode.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_nan.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_permutation.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_permute.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_permute_double.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_permute_vector_double.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_pow_int.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_precision.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_sf_erf.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_sf_exp.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_sf_result.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_sys.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_types.h'
[MSG] [Sun Apr 13 15:15:46 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_vector.h_old'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_vector_complex.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/gsl_vector_double.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/init.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/init_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/lu.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/math.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_init.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_init_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_rowcol.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_rowcol_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_swap.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_swap_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_view.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_view.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/matrix_view_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/minmax.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/minmax_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/oper.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/oper_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/permutation.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/permutation_init.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/permute.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/permute_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/prop.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/prop_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/source_dot_r.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/source_gemm_r.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/source_gemv_r.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/source_trmv_r.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/source_trsv_r.h'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/stream.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/strerror.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/subvector.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/subvector_source.c'
[MSG] [Sun Apr 13 15:15:47 2008] Extracted 'Wurst/src/wurstsrc/gsldir/swap.c'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/swap_source.c'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/templates_off.h'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/templates_on.h'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/vector.c'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/vector_source.c'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/view.c'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/view.h'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/gsldir/view_source.c'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/src/wurstsrc/ranlibdir/'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/t/'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/t/00basic.t'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst/t/01func_test.t'
[MSG] [Sun Apr 13 15:15:48 2008] Extracted 'Wurst' to '/Volumes/Media/smoke/blead/.cpanplus/5.11.0/build/Wurst'
[MSG] [Sun Apr 13 15:15:52 2008] Checking if your kit is complete...
Looks good
Writing Makefile for LibMiniGSL
Writing Makefile for LibWurst
Writing Makefile for Wurst
Writing Makefile for Wurst
[MSG] [Sun Apr 13 15:15:52 2008] DEFAULT 'filter_prereqs' HANDLER RETURNING 'sub return value'
[MSG] [Sun Apr 13 15:18:14 2008] cp lib/Wurst.pm blib/lib/Wurst.pm
AutoSplitting blib/lib/Wurst.pm (blib/lib/auto/Wurst)
Starting to make wurstsrc/libwurst.a
cd wurstsrc && make
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" align.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" altscores.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" amino_a.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" binver.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" class_model.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" classifyStructure.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" cmp_dmat.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" common.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" compound.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" coord.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" coordinfo.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" dbg.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" dihedral.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" e_malloc.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" fio.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" geo_gap.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" lsqf.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" matrix.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" mgc_num.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" misc.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" model.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" mprintf.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" multialign.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" pair_set.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" pair_set_chim.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" pair_set_p.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" param_fx.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" pdbin.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" pdbout.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" prob_vec.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" rand.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" read_ac.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" read_ac_strct.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" read_blst.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" read_mat.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" read_sec.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" read_seq.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" rescore.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" scor_set.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" score_fx.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" score_mat.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" score_probvec.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" score_rand.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" score_sec.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" score_smat.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" scratch.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" sec_s.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" silly.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" solv_data.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" str.c
cc -c -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" vec.c
rm -f libwurst.a
ar cr libwurst.a align.o altscores.o amino_a.o binver.o class_model.o classifyStructure.o cmp_dmat.o common.o compound.o coord.o coordinfo.o dbg.o dihedral.o e_malloc.o fio.o geo_gap.o lsqf.o matrix.o mgc_num.o misc.o model.o mprintf.o multialign.o pair_set.o pair_set_chim.o pair_set_p.o param_fx.o pdbin.o pdbout.o prob_vec.o rand.o read_ac.o read_ac_strct.o read_blst.o read_mat.o read_sec.o read_seq.o rescore.o scor_set.o score_fx.o score_mat.o score_probvec.o score_rand.o score_sec.o score_smat.o scratch.o sec_s.o silly.o solv_data.o str.o vec.o
ranlib libwurst.a
Finished making wurstsrc/libwurst.a
Starting to make wurstsrc/gsldir/libminigsl.a
cd wurstsrc/gsldir && make
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" blas.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" error.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" permutation_init.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" lu.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" init.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" view.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" strerror.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" block_init.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" matrix.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" matrix_view.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" matrix_init.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" matrix_rowcol.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" matrix_swap.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" erfc.c
cc -c -I.. -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"\" -DXS_VERSION=\"\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" stream.c
rm -f libminigsl.a
ar cr libminigsl.a blas.o error.o permutation_init.o lu.o init.o view.o strerror.o block_init.o matrix.o matrix_view.o matrix_init.o matrix_rowcol.o matrix_swap.o erfc.o stream.o
ranlib libminigsl.a
Finished making wurstsrc/gsldir/libminigsl.a
make[2]: Nothing to be done for `all'.
/Volumes/Media/smoke/blead/bin/perl5.11.0 /Volumes/Media/smoke/blead/lib/perl5/5.11.0/ExtUtils/xsubpp -typemap /Volumes/Media/smoke/blead/lib/perl5/5.11.0/ExtUtils/typemap -typemap typemap Wurst.xs > Wurst.xsc && mv Wurst.xsc Wurst.c
cc -c -Iwurstsrc -Iwurstsrc/gsldir -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include -O3 -DVERSION=\"0.01\" -DXS_VERSION=\"0.01\" "-I/Volumes/Media/smoke/blead/lib/perl5/5.11.0/darwin-thread-multi-64int-2level/CORE" Wurst.c
Running Mkbootstrap for Wurst ()
chmod 644 Wurst.bs
rm -f ../blib/arch/auto/Wurst/Wurst.bundle
env MACOSX_DEPLOYMENT_TARGET=10.3 cc -bundle -undefined dynamic_lookup -L/usr/local/lib Wurst.o -o ../blib/arch/auto/Wurst/Wurst.bundle wurstsrc/libwurst.a wurstsrc/gsldir/libminigsl.a \
\
chmod 755 ../blib/arch/auto/Wurst/Wurst.bundle
cp Wurst.bs ../blib/arch/auto/Wurst/Wurst.bs
chmod 644 ../blib/arch/auto/Wurst/Wurst.bs
Manifying blib/man3/Wurst.3
[ERROR] [Sun Apr 13 15:18:17 2008] MAKE TEST failed: Illegal seek make[2]: Nothing to be done for `all'.
PERL_DL_NONLAZY=1 /Volumes/Media/smoke/blead/bin/perl5.11.0 "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/00basic..........ok
t/01func_test...... Dubious, test returned 1 (wstat 256, 0x100)
Failed 16/16 subtests
Test Summary Report
-------------------
t/01func_test.t (Wstat: 256 Tests: 0 Failed: 0)
Non-zero exit status: 1
Parse errors: Bad plan. You planned 16 tests but ran 0.
Files=2, Tests=4, 2 wallclock secs ( 0.07 usr 0.04 sys + 1.06 cusr 0.19 csys = 1.36 CPU)
Result: FAIL
perl5.11.0(16184) malloc: *** vm_allocate(size=1711407104) failed (error code=3)
perl5.11.0(16184) malloc: *** error: can't allocate region
perl5.11.0(16184) malloc: *** set a breakpoint in szone_error to debug
e_malloc: Cannot allocate memory
e_malloc: out of memory, file coord.c, line 169 getting 1711407104 bytes
Failed 1/2 test programs. 0/4 subtests failed.
make: *** [test_dynamic] Error 1
[MSG] [Sun Apr 13 15:18:17 2008] DEFAULT 'proceed_on_test_failure' HANDLER RETURNING 'sub return value'
******************************** NOTE ********************************
The comments above are created mechanically, possibly without manual
checking by the sender. As there are many people performing automatic
tests on each upload to CPAN, it is likely that you will receive
identical messages about the same problem.
If you believe that the message is mistaken, please reply to the first
one with correction and/or additional informations, and do not take
it personally. We appreciate your patience. :)
**********************************************************************
Additional comments:
This report was machine-generated by CPAN::YACSmoke 0.0307. Powered by POE::Component::CPAN::YACSmoke.
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
PATH = /bin:/sbin:/usr/bin:/usr/sbin:/usr/local/bin:/usr/local/sbin
PERL5LIB = :/Volumes/Media/smoke/blead/.cpanplus/5.11.0/build/Wurst/blib/lib:/Volumes/Media/smoke/blead/.cpanplus/5.11.0/build/Wurst/blib/arch:/Volumes/Media/smoke/blead/.cpanplus/5.11.0/build/Wurst/blib
PERL5_CPANPLUS_IS_RUNNING = 15484
PERL5_CPANPLUS_IS_VERSION = 0.84
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
Perl: $^X = /Volumes/Media/smoke/blead/bin/perl5.11.0
UID: $< = 502
EUID: $> = 502
GID: $( = 502 502
EGID: $) = 502 502
-------------------------------
--
Summary of my perl5 (revision 5 version 11 subversion 0 patch 33659) configuration:
Platform:
osname=darwin, osvers=8.10.0, archname=darwin-thread-multi-64int-2level
uname='darwin afalglas.bingosnet.co.uk 8.10.0 darwin kernel version 8.10.0: wed may 23 16:50:59 pdt 2007; root:xnu-792.21.3~1release_ppc power macintosh powerpc '
config_args='-de -Dusedevel -Dprefix=/Volumes/Media/smoke/blead -Duse64bitint -Dusethreads'
hint=recommended, useposix=true, d_sigaction=define
useithreads=define, usemultiplicity=define
useperlio=define, d_sfio=undef, uselargefiles=define, usesocks=undef
use64bitint=define, use64bitall=undef, uselongdouble=undef
usemymalloc=n, bincompat5005=undef
Compiler:
cc='cc', ccflags ='-fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include',
optimize='-O3',
cppflags='-no-cpp-precomp -fno-common -DPERL_DARWIN -no-cpp-precomp -fno-strict-aliasing -pipe -I/usr/local/include'
ccversion='', gccversion='4.0.1 (Apple Computer, Inc. build 5367)', gccosandvers=''
intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=87654321
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
ivtype='long long', ivsize=8, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8
alignbytes=8, prototype=define
Linker and Libraries:
ld='env MACOSX_DEPLOYMENT_TARGET=10.3 cc', ldflags =' -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib
libs=-ldbm -ldl -lm -lc
perllibs=-ldl -lm -lc
libc=/usr/lib/libc.dylib, so=dylib, useshrplib=false, libperl=libperl.a
gnulibc_version=''
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=bundle, d_dlsymun=undef, ccdlflags=' '
cccdlflags=' ', lddlflags=' -bundle -undefined dynamic_lookup -L/usr/local/lib'
Thread Next